home uniprot
Protein Search Site Search
 
       Home      About PIR     Databases      Search/Retrieval      Download      Support

back to PRO homepage

Properties defined in PRO

obo:BFO_0000050
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "BFO:0000050"^^xsd:string
rdf:type owl:ObjectProperty
rdf:type owl:TransitiveProperty
rdfs:label "part_of"^^xsd:string


obo:BFO_0000051
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "BFO:0000051"^^xsd:string
rdf:type owl:ObjectProperty
rdf:type owl:TransitiveProperty
rdfs:label "has_part"^^xsd:string


obo:IAO_0000115
rdf:type owl:AnnotationProperty
rdfs:label "definition"^^xsd:string


obo:IAO_0100001
rdf:type owl:AnnotationProperty
rdfs:label "term replaced by"^^xsd:string


obo:RO_0000051
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "RO:0000051"^^xsd:string
oboInOwl:is_transitive false
rdf:type owl:ObjectProperty
rdfs:label "has_function"^^xsd:string


obo:RO_0000056
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "RO:0000056"^^xsd:string
oboInOwl:is_transitive false
rdf:type owl:ObjectProperty
rdfs:label "participates_in"^^xsd:string


obo:RO_0000086
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "RO:0000086"^^xsd:string
oboInOwl:is_transitive false
rdf:type owl:ObjectProperty
rdfs:label "has_quality"^^xsd:string


obo:RO_0001000
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "RO:0001000"^^xsd:string
rdf:type owl:ObjectProperty
rdf:type owl:TransitiveProperty
rdfs:label "derives_from"^^xsd:string


obo:RO_0001025
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "RO:0001025"^^xsd:string
rdf:type owl:ObjectProperty
rdf:type owl:TransitiveProperty
rdfs:label "located_in"^^xsd:string


obo:RO_0002160
obo:IAO_0000115 "U only_in_taxon T: U is a feature found in only in organisms of species of taxon T. The feature cannot be found in an organism of any species outside of (not subsumed by) that taxon. Down-propagates in U hierarchy, up-propagates in T hierarchy (species taxonomy). Implies applicable_to_taxon."^^xsd:string
oboInOwl:hasExactSynonym "never_outside_taxon"^^xsd:string
oboInOwl:hasExactSynonym "specific_to"^^xsd:string
oboInOwl:hasExactSynonym "specific_to_taxon"^^xsd:string
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "RO:0002160"^^xsd:string
oboInOwl:is_transitive false
rdf:type owl:ObjectProperty
rdfs:comment "Down-propagates. The original name for this in the paper is 'specific_to'. Applicable to genes because some genes are lost in sub-species (strains) of a species."^^xsd:string
rdfs:label "only_in_taxon"^^xsd:string


obo:RO_0002180
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "RO:0002180"^^xsd:string
oboInOwl:is_transitive false
rdf:type owl:ObjectProperty
rdfs:label "has_component"^^xsd:string


pr:PRO-common-name
oboInOwl:hasScope oboInOwl:hasExactSynonym
rdf:type owl:AnnotationProperty
rdfs:label "Label appended to organism-specific terms in place of scientific name"^^xsd:string
rdfs:subPropertyOf oboInOwl:SynonymTypeProperty


pr:PRO-proteoform-ftid
oboInOwl:hasScope oboInOwl:hasExactSynonym
rdf:type owl:AnnotationProperty
rdfs:label "Synonyms for proteoforms based on use of UniProtKb feature identifier (FTId) and positions and types of modifications or variations"^^xsd:string
rdfs:subPropertyOf oboInOwl:SynonymTypeProperty


pr:PRO-proteoform-std
oboInOwl:hasScope oboInOwl:hasExactSynonym
rdf:type owl:AnnotationProperty
rdfs:label "Synonyms for proteoforms based on use of UniProtKb accession, subsequence range, and positions and types of modifications or variations"^^xsd:string
rdfs:subPropertyOf oboInOwl:SynonymTypeProperty


pr:PRO-short-label
oboInOwl:hasScope oboInOwl:hasExactSynonym
rdf:type owl:AnnotationProperty
rdfs:label "Unique short label for PRO terms for display purposes"^^xsd:string
rdfs:subPropertyOf oboInOwl:SynonymTypeProperty


pr:PSI-MOD-label
oboInOwl:hasScope oboInOwl:hasExactSynonym
rdf:type owl:AnnotationProperty
rdfs:label "Unique short label curated by PSI-MOD"^^xsd:string
rdfs:subPropertyOf oboInOwl:SynonymTypeProperty


pr:has_gene_template
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "has_gene_template"^^xsd:string
oboInOwl:is_transitive false
rdf:type owl:ObjectProperty
rdfs:label "has_gene_template"^^xsd:string


pr:has_modification
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "has_modification"^^xsd:string
rdf:type owl:ObjectProperty
rdf:type owl:TransitiveProperty
rdfs:label "has_modification"^^xsd:string
owl:deprecated true


pr:lacks_modification
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "lacks_modification"^^xsd:string
rdf:type owl:ObjectProperty
rdf:type owl:TransitiveProperty
rdfs:label "lacks_modification"^^xsd:string
owl:deprecated true


pr:lacks_part
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "lacks_part"^^xsd:string
oboInOwl:is_transitive false
rdf:type owl:ObjectProperty
rdfs:label "lacks_part"^^xsd:string


pr:non-covalently_bound_to
obo:IAO_0000115 "A relation that holds between two distinct chemical entities that are held in close proximity to each other specifically via the force of non-covalent interactions. Such entities will, at all times of the interaction, colocalize with each other."^^xsd:string
oboInOwl:hasOBONamespace "protein"^^xsd:string
oboInOwl:id "non-covalently_bound_to"^^xsd:string
rdf:type owl:ObjectProperty
rdf:type owl:SymmetricProperty
rdfs:domain obo:CHEBI_24431
rdfs:label "non-covalently_bound_to"^^xsd:string
rdfs:range obo:CHEBI_24431


oboInOwl:SynonymTypeProperty
rdf:type owl:AnnotationProperty
rdfs:label "synonym_type_property"^^xsd:string


oboInOwl:auto-generated-by
rdf:type owl:AnnotationProperty


oboInOwl:consider
rdf:type owl:AnnotationProperty
rdfs:label "consider"^^xsd:string


oboInOwl:date
rdf:type owl:AnnotationProperty


oboInOwl:default-namespace
rdf:type owl:AnnotationProperty


oboInOwl:hasAlternativeId
rdf:type owl:AnnotationProperty
rdfs:label "has_alternative_id"^^xsd:string


oboInOwl:hasBroadSynonym
rdf:type owl:AnnotationProperty
rdfs:label "has_broad_synonym"^^xsd:string


oboInOwl:hasDbXref
rdf:type owl:AnnotationProperty
rdfs:label "database_cross_reference"^^xsd:string


oboInOwl:hasExactSynonym
rdf:type owl:AnnotationProperty
rdfs:label "has_exact_synonym"^^xsd:string


oboInOwl:hasNarrowSynonym
rdf:type owl:AnnotationProperty
rdfs:label "has_narrow_synonym"^^xsd:string


oboInOwl:hasOBOFormatVersion
rdf:type owl:AnnotationProperty
rdfs:label "has_obo_format_version"^^xsd:string


oboInOwl:hasOBONamespace
rdf:type owl:AnnotationProperty
rdfs:label "has_obo_namespace"^^xsd:string


oboInOwl:hasRelatedSynonym
rdf:type owl:AnnotationProperty
rdfs:label "has_related_synonym"^^xsd:string


oboInOwl:hasScope
rdf:type owl:AnnotationProperty
rdfs:label "has_scope"^^xsd:string


oboInOwl:hasSynonymType
rdf:type owl:AnnotationProperty
rdfs:label "has_synonym_type"^^xsd:string


oboInOwl:id
rdf:type owl:AnnotationProperty


oboInOwl:is_transitive
rdf:type owl:AnnotationProperty


oboInOwl:saved-by
rdf:type owl:AnnotationProperty


rdfs:comment
rdf:type owl:AnnotationProperty


rdfs:label
rdf:type owl:AnnotationProperty


owl:deprecated
rdf:type owl:AnnotationProperty




PIR
 HomeAbout PIRDatabasesSearch/AnalysisDownloadSupport  SITE MAPTERMS OF USE
©2017 Protein Information Resource